A Learning-from-noise Dilated Wide Activation Network for denoising Arterial Spin Labeling Perfusion Images

Arterial spin labeling (ASL) perfusion MRI provides a non-invasive way to quantify cerebral blood flow (CBF) but it still suffers from a low signal-to-noise-ratio (SNR). Using deep machine learning (DL), several groups have shown encouraging denoising results. Interestingly, the improvement was obtained when the deep neural network was trained using noise-contaminated surrogate reference because of the lack of golden standard high quality ASL CBF images. More strikingly, the output of these DL ASL networks (ASLDN) showed even higher SNR than the surrogate reference. This phenomenon indicates a learning-from-noise capability of deep networks for ASL CBF image denoising, which can be further enhanced by network optimization. In this study, we proposed a new ASLDN to test whether similar or even better ASL CBF image quality can be achieved in the case of highly noisy training reference. Different experiments were performed to validate the learning-from-noise hypothesis. The results showed that the learning-from-noise strategy produced better output quality than ASLDN trained with relatively high SNR reference.

Denoising Arterial Spin Labeling Cerebral Blood Flow Images Using Deep Learning

Arterial spin labeling perfusion MRI is a noninvasive technique for measuring quantitative cerebral blood flow (CBF), but the measurement is subject to a low signal-to-noise-ratio(SNR). Various post-processing methods have been proposed to denoise ASL MRI but only provide moderate improvement. Deep learning (DL) is an emerging technique that can learn the most representative signal from data without prior modeling which can be highly complex and analytically indescribable. The purpose of this study was to assess whether the record breaking performance of DL can be translated into ASL MRI denoising. We used convolutional neural network (CNN) to build the DL ASL denosing model (DL-ASL) to inherently consider the inter-voxel correlations. To better guide DL-ASL training, we incorporated prior knowledge about ASL MRI: the structural similarity between ASL CBF map and grey matter probability map. A relatively large sample data were used to train the model which was subsequently applied to a new set of data for testing. Experimental results showed that DL-ASL achieved state-of-the-art denoising performance for ASL MRI as compared to current routine methods in terms of higher SNR, keeping CBF quantification quality while shorten the acquisition time by 75%, and automatic partial volume correction.