$E \times SO$-Equivariant Networks for Spherical Deconvolution in Diffusion MRI

We present Roto-Translation Equivariant Spherical Deconvolution (RT-ESD), an $E(3)\times SO(3)$ equivariant framework for sparse deconvolution of volumes where each voxel contains a spherical signal. Such 6D data naturally arises in diffusion MRI (dMRI), a medical imaging modality widely used to measure microstructure and structural connectivity. As each dMRI voxel is typically a mixture of various overlapping structures, there is a need for blind deconvolution to recover crossing anatomical structures such as white matter tracts. Existing dMRI work takes either an iterative or deep learning approach to sparse spherical deconvolution, yet it typically does not account for relationships between neighboring measurements. This work constructs equivariant deep learning layers which respect to symmetries of spatial rotations, reflections, and translations, alongside the symmetries of voxelwise spherical rotations. As a result, RT-ESD improves on previous work across several tasks including fiber recovery on the DiSCo dataset, deconvolution-derived partial volume estimation on real-world \textit{in vivo} human brain dMRI, and improved downstream reconstruction of fiber tractograms on the Tractometer dataset. Our implementation is available at https://github.com/AxelElaldi/e3so3_conv

Equivariant Spherical Deconvolution: Learning Sparse Orientation Distribution Functions from Spherical Data

We present a rotation-equivariant unsupervised learning framework for the sparse deconvolution of non-negative scalar fields defined on the unit sphere. Spherical signals with multiple peaks naturally arise in Diffusion MRI (dMRI), where each voxel consists of one or more signal sources corresponding to anisotropic tissue structure such as white matter. Due to spatial and spectral partial voluming, clinically-feasible dMRI struggles to resolve crossing-fiber white matter configurations, leading to extensive development in spherical deconvolution methodology to recover underlying fiber directions. However, these methods are typically linear and struggle with small crossing-angles and partial volume fraction estimation. In this work, we improve on current methodologies by nonlinearly estimating fiber structures via unsupervised spherical convolutional networks with guaranteed equivariance to spherical rotation. Experimentally, we first validate our proposition via extensive single and multi-shell synthetic benchmarks demonstrating competitive performance against common baselines. We then show improved downstream performance on fiber tractography measures on the Tractometer benchmark dataset. Finally, we show downstream improvements in terms of tractography and partial volume estimation on a multi-shell dataset of human subjects.