Spectral Graph Neural Networks (GNNs) are gaining attention because they can surpass the limitations of message-passing GNNs by learning spectral filters that capture essential frequency information in graph data through task supervision. However, previous research suggests that the choice of filter frequency is tied to the graph's homophily level, a connection that hasn't been thoroughly explored in existing spectral GNNs. To address this gap, the study conducts both theoretical and empirical analyses, revealing that low-frequency filters have a positive correlation with homophily, while high-frequency filters have a negative correlation. This leads to the introduction of a shape-aware regularization technique applied to a Newton Interpolation-based spectral filter, enabling the customization of polynomial spectral filters that align with desired homophily levels. Extensive experiments demonstrate that NewtonNet successfully achieves the desired filter shapes and exhibits superior performance on both homophilous and heterophilous datasets.