Semi-automatic staging area for high-quality structured data extraction from scientific literature

In this study, we propose a staging area for ingesting new superconductors' experimental data in SuperCon that is machine-collected from scientific articles. Our objective is to enhance the efficiency of updating SuperCon while maintaining or enhancing the data quality. We present a semi-automatic staging area driven by a workflow combining automatic and manual processes on the extracted database. An anomaly detection automatic process aims to pre-screen the collected data. Users can then manually correct any errors through a user interface tailored to simplify the data verification on the original PDF documents. Additionally, when a record is corrected, its raw data is collected and utilised to improve machine learning models as training data. Evaluation experiments demonstrate that our staging area significantly improves curation quality. We compare the interface with the traditional manual approach of reading PDF documents and recording information in an Excel document. Using the interface boosts the precision and recall by 6% and 50%, respectively to an average increase of 40% in F1-score.