SCI: A spectrum concentrated implicit neural compression for biomedical data

Massive collection and explosive growth of the huge amount of medical data, demands effective compression for efficient storage, transmission and sharing. Readily available visual data compression techniques have been studied extensively but tailored for nature images/videos, and thus show limited performance on medical data which are of different characteristics. Emerging implicit neural representation (INR) is gaining momentum and demonstrates high promise for fitting diverse visual data in target-data-specific manner, but a general compression scheme covering diverse medical data is so far absent. To address this issue, we firstly derive a mathematical explanation for INR's spectrum concentration property and an analytical insight on the design of compression-oriented INR architecture. Further, we design a funnel shaped neural network capable of covering broad spectrum of complex medical data and achieving high compression ratio. Based on this design, we conduct compression via optimization under given budget and propose an adaptive compression approach SCI, which adaptively partitions the target data into blocks matching the concentrated spectrum envelop of the adopted INR, and allocates parameter with high representation accuracy under given compression ratio. The experiments show SCI's superior performance over conventional techniques and wide applicability across diverse medical data.