BBK: a simpler, faster algorithm for enumerating maximal bicliques in large sparse bipartite graphs

Bipartite graphs are a prevalent modeling tool for real-world networks, capturing interactions between vertices of two different types. Within this framework, bicliques emerge as crucial structures when studying dense subgraphs: they are sets of vertices such that all vertices of the first type interact with all vertices of the second type. Therefore, they allow identifying groups of closely related vertices of the network, such as individuals with similar interests or webpages with similar contents. This article introduces a new algorithm designed for the exhaustive enumeration of maximal bicliques within a bipartite graph. This algorithm, called BBK for Bipartite Bron-Kerbosch, is a new extension to the bipartite case of the Bron-Kerbosch algorithm, which enumerates the maximal cliques in standard (non-bipartite) graphs. It is faster than the state-of-the-art algorithms and allows the enumeration on massive bipartite graphs that are not manageable with existing implementations. We analyze it theoretically to establish two complexity formulas: one as a function of the input and one as a function of the output characteristics of the algorithm. We also provide an open-access implementation of BBK in C++, which we use to experiment and validate its efficiency on massive real-world datasets and show that its execution time is shorter in practice than state-of-the art algorithms. These experiments also show that the order in which the vertices are processed, as well as the choice of one of the two types of vertices on which to initiate the enumeration have an impact on the computation time.

LSCPM: communities in massive real-world Link Streams by Clique Percolation Method

Community detection is a popular approach to understand the organization of interactions in static networks. For that purpose, the Clique Percolation Method (CPM), which involves the percolation of k-cliques, is a well-studied technique that offers several advantages. Besides, studying interactions that occur over time is useful in various contexts, which can be modeled by the link stream formalism. The Dynamic Clique Percolation Method (DCPM) has been proposed for extending CPM to temporal networks. However, existing implementations are unable to handle massive datasets. We present a novel algorithm that adapts CPM to link streams, which has the advantage that it allows us to speed up the computation time with respect to the existing DCPM method. We evaluate it experimentally on real datasets and show that it scales to massive link streams. For example, it allows to obtain a complete set of communities in under twenty-five minutes for a dataset with thirty million links, what the state of the art fails to achieve even after a week of computation. We further show that our method provides communities similar to DCPM, but slightly more aggregated. We exhibit the relevance of the obtained communities in real world cases, and show that they provide information on the importance of vertices in the link streams.

Faster maximal clique enumeration in large real-world link streams

Link streams offer a good model for representing interactions over time. They consist of links $(b,e,u,v)$, where $u$ and $v$ are vertices interacting during the whole time interval $[b,e]$. In this paper, we deal with the problem of enumerating maximal cliques in link streams. A clique is a pair $(C,[t_0,t_1])$, where $C$ is a set of vertices that all interact pairwise during the full interval $[t_0,t_1]$. It is maximal when neither its set of vertices nor its time interval can be increased. Some of the main works solving this problem are based on the famous Bron-Kerbosch algorithm for enumerating maximal cliques in graphs. We take this idea as a starting point to propose a new algorithm which matches the cliques of the instantaneous graphs formed by links existing at a given time $t$ to the maximal cliques of the link stream. We prove its validity and compute its complexity, which is better than the state-of-the art ones in many cases of interest. We also study the output-sensitive complexity, which is close to the output size, thereby showing that our algorithm is efficient. To confirm this, we perform experiments on link streams used in the state of the art, and on massive link streams, up to 100 million links. In all cases our algorithm is faster, mostly by a factor of at least 10 and up to a factor of $10^4$. Moreover, it scales to massive link streams for which the existing algorithms are not able to provide the solution.

Clique percolation method: memory efficient almost exact communities

Automatic detection of relevant groups of nodes in large real-world graphs, i.e. community detection, has applications in many fields and has received a lot of attention in the last twenty years. The most popular method designed to find overlapping communities (where a node can belong to several communities) is perhaps the clique percolation method (CPM). This method formalizes the notion of community as a maximal union of $k$-cliques that can be reached from each other through a series of adjacent $k$-cliques, where two cliques are adjacent if and only if they overlap on $k-1$ nodes. Despite much effort CPM has not been scalable to large graphs for medium values of $k$. Recent work has shown that it is possible to efficiently list all $k$-cliques in very large real-world graphs for medium values of $k$. We build on top of this work and scale up CPM. In cases where this first algorithm faces memory limitations, we propose another algorithm, CPMZ, that provides a solution close to the exact one, using more time but less memory.

Computing Betweenness Centrality in Link Streams

Betweeness centrality is one of the most important concepts in graph analysis. It was recently extended to link streams, a graph generalization where links arrive over time. However, its computation raises non-trivial issues, due in particular to the fact that time is considered as continuous. We provide here the first algorithms to compute this generalized betweenness centrality, as well as several companion algorithms that have their own interest. They work in polynomial time and space, we illustrate them on typical examples, and we provide an implementation.

Stream Graphs and Link Streams for the Modeling of Interactions over Time

Graph theory provides a language for studying the structure of relations, and it is often used to study interactions over time too. However, it poorly captures the both temporal and structural nature of interactions, that calls for a dedicated formalism. In this paper, we generalize graph concepts in order to cope with both aspects in a consistent way. We start with elementary concepts like density, clusters, or paths, and derive from them more advanced concepts like cliques, degrees, clustering coefficients, or connected components. We obtain a language to directly deal with interactions over time, similar to the language provided by graphs to deal with relations. This formalism is self-consistent: usual relations between different concepts are preserved. It is also consistent with graph theory: graph concepts are special cases of the ones we introduce. This makes it easy to generalize higher-level objects such as quotient graphs, line graphs, k-cores, and centralities. This paper also considers discrete versus continuous time assumptions, instantaneous links, and extensions to more complex cases.