Generalized autocorrelation analysis for multi-target detection

We study the multi-target detection problem of recovering a target signal from a noisy measurement that contains multiple copies of the signal at unknown locations. Motivated by the structure reconstruction problem in cryo-electron microscopy, we focus on the high noise regime, where noise hampers accurate detection of signal occurrences. Previous works proposed an autocorrelation analysis framework to estimate the signal directly from the measurement, without detecting signal occurrences. Specifically, autocorrelation analysis entails finding a signal that best matches the observable autocorrelations by minimizing a least squares objective. This paper extends this line of research by developing a generalized autocorrelation analysis framework that replaces the least squares by a weighted least squares. The optimal weights can be computed directly from the data and guarantee favorable statistical properties. We demonstrate signal recovery from highly noisy measurements, and show that the proposed framework outperforms autocorrelation analysis in a wide range of parameters.

The generalized method of moments for multi-reference alignment

This paper studies the application of the generalized method of moments (GMM) to multi-reference alignment (MRA): the problem of estimating a signal from its circularly-translated and noisy copies. We begin by proving that the GMM estimator maintains its asymptotic optimality for statistical models with group symmetry, including MRA. Then, we conduct a comprehensive numerical study and show that the GMM substantially outperforms the classical method of moments, whose application to MRA has been studied thoroughly in the literature. We also formulate the GMM to estimate a three-dimensional molecular structure using cryo-electron microscopy and present numerical results on simulated data.