Fine-Grained Classification for Poisonous Fungi Identification with Transfer Learning

FungiCLEF 2024 addresses the fine-grained visual categorization (FGVC) of fungi species, with a focus on identifying poisonous species. This task is challenging due to the size and class imbalance of the dataset, subtle inter-class variations, and significant intra-class variability amongst samples. In this paper, we document our approach in tackling this challenge through the use of ensemble classifier heads on pre-computed image embeddings. Our team (DS@GT) demonstrate that state-of-the-art self-supervised vision models can be utilized as robust feature extractors for downstream application of computer vision tasks without the need for task-specific fine-tuning on the vision backbone. Our approach achieved the best Track 3 score (0.345), accuracy (78.4%) and macro-F1 (0.577) on the private test set in post competition evaluation. Our code is available at https://github.com/dsgt-kaggle-clef/fungiclef-2024.

DS@GT eRisk 2024: Sentence Transformers for Social Media Risk Assessment

We present working notes for DS@GT team in the eRisk 2024 for Tasks 1 and 3. We propose a ranking system for Task 1 that predicts symptoms of depression based on the Beck Depression Inventory (BDI-II) questionnaire using binary classifiers trained on question relevancy as a proxy for ranking. We find that binary classifiers are not well calibrated for ranking, and perform poorly during evaluation. For Task 3, we use embeddings from BERT to predict the severity of eating disorder symptoms based on user post history. We find that classical machine learning models perform well on the task, and end up competitive with the baseline models. Representation of text data is crucial in both tasks, and we find that sentence transformers are a powerful tool for downstream modeling. Source code and models are available at \url{https://github.com/dsgt-kaggle-clef/erisk-2024}.

Transfer Learning with Self-Supervised Vision Transformers for Snake Identification

We present our approach for the SnakeCLEF 2024 competition to predict snake species from images. We explore and use Meta's DINOv2 vision transformer model for feature extraction to tackle species' high variability and visual similarity in a dataset of 182,261 images. We perform exploratory analysis on embeddings to understand their structure, and train a linear classifier on the embeddings to predict species. Despite achieving a score of 39.69, our results show promise for DINOv2 embeddings in snake identification. All code for this project is available at https://github.com/dsgt-kaggle-clef/snakeclef-2024.

Tile Compression and Embeddings for Multi-Label Classification in GeoLifeCLEF 2024

We explore methods to solve the multi-label classification task posed by the GeoLifeCLEF 2024 competition with the DS@GT team, which aims to predict the presence and absence of plant species at specific locations using spatial and temporal remote sensing data. Our approach uses frequency-domain coefficients via the Discrete Cosine Transform (DCT) to compress and pre-compute the raw input data for convolutional neural networks. We also investigate nearest neighborhood models via locality-sensitive hashing (LSH) for prediction and to aid in the self-supervised contrastive learning of embeddings through tile2vec. Our best competition model utilized geolocation features with a leaderboard score of 0.152 and a best post-competition score of 0.161. Source code and models are available at https://github.com/dsgt-kaggle-clef/geolifeclef-2024.

Transfer Learning with Pseudo Multi-Label Birdcall Classification for DS@GT BirdCLEF 2024

We present working notes for the DS@GT team on transfer learning with pseudo multi-label birdcall classification for the BirdCLEF 2024 competition, focused on identifying Indian bird species in recorded soundscapes. Our approach utilizes production-grade models such as the Google Bird Vocalization Classifier, BirdNET, and EnCodec to address representation and labeling challenges in the competition. We explore the distributional shift between this year's edition of unlabeled soundscapes representative of the hidden test set and propose a pseudo multi-label classification strategy to leverage the unlabeled data. Our highest post-competition public leaderboard score is 0.63 using BirdNET embeddings with Bird Vocalization pseudo-labels. Our code is available at https://github.com/dsgt-kaggle-clef/birdclef-2024

Multi-Label Plant Species Classification with Self-Supervised Vision Transformers

We present a transfer learning approach using a self-supervised Vision Transformer (DINOv2) for the PlantCLEF 2024 competition, focusing on the multi-label plant species classification. Our method leverages both base and fine-tuned DINOv2 models to extract generalized feature embeddings. We train classifiers to predict multiple plant species within a single image using these rich embeddings. To address the computational challenges of the large-scale dataset, we employ Spark for distributed data processing, ensuring efficient memory management and processing across a cluster of workers. Our data processing pipeline transforms images into grids of tiles, classifying each tile, and aggregating these predictions into a consolidated set of probabilities. Our results demonstrate the efficacy of combining transfer learning with advanced data processing techniques for multi-label image classification tasks. Our code is available at https://github.com/dsgt-kaggle-clef/plantclef-2024.

Transfer Learning with Semi-Supervised Dataset Annotation for Birdcall Classification

We present working notes on transfer learning with semi-supervised dataset annotation for the BirdCLEF 2023 competition, focused on identifying African bird species in recorded soundscapes. Our approach utilizes existing off-the-shelf models, BirdNET and MixIT, to address representation and labeling challenges in the competition. We explore the embedding space learned by BirdNET and propose a process to derive an annotated dataset for supervised learning. Our experiments involve various models and feature engineering approaches to maximize performance on the competition leaderboard. The results demonstrate the effectiveness of our approach in classifying bird species and highlight the potential of transfer learning and semi-supervised dataset annotation in similar tasks.

Motif Mining and Unsupervised Representation Learning for BirdCLEF 2022

We build a classification model for the BirdCLEF 2022 challenge using unsupervised methods. We implement an unsupervised representation of the training dataset using a triplet loss on spectrogram representation of audio motifs. Our best model performs with a score of 0.48 on the public leaderboard.