Diffusion Transformers (DiTs) are a powerful yet underexplored class of generative models compared to U-Net-based diffusion models. To bridge this gap, we introduce TIDE (Temporal-aware Sparse Autoencoders for Interpretable Diffusion transformErs), a novel framework that enhances temporal reconstruction within DiT activation layers across denoising steps. TIDE employs Sparse Autoencoders (SAEs) with a sparse bottleneck layer to extract interpretable and hierarchical features, revealing that diffusion models inherently learn hierarchical features at multiple levels (e.g., 3D, semantic, class) during generative pre-training. Our approach achieves state-of-the-art reconstruction performance, with a mean squared error (MSE) of 1e-3 and a cosine similarity of 0.97, demonstrating superior accuracy in capturing activation dynamics along the denoising trajectory. Beyond interpretability, we showcase TIDE's potential in downstream applications such as sparse activation-guided image editing and style transfer, enabling improved controllability for generative systems. By providing a comprehensive training and evaluation protocol tailored for DiTs, TIDE contributes to developing more interpretable, transparent, and trustworthy generative models.