Deep Learning techniques have excelled at generating embedding spaces that capture semantic similarities between items. Often these representations are paired, enabling experiments with analogies (pairs within the same domain) and cross-modality (pairs across domains). These experiments are based on specific assumptions about the geometry of embedding spaces, which allow finding paired items by extrapolating the positional relationships between embedding pairs in the training dataset, allowing for tasks such as finding new analogies, and multimodal zero-shot classification. In this work, we propose a metric to evaluate the similarity between paired item representations. Our proposal is built from the structural similarity between the nearest-neighbors induced graphs of each representation, and can be configured to compare spaces based on different distance metrics and on different neighborhood sizes. We demonstrate that our proposal can be used to identify similar structures at different scales, which is hard to achieve with kernel methods such as Centered Kernel Alignment (CKA). We further illustrate our method with two case studies: an analogy task using GloVe embeddings, and zero-shot classification in the CIFAR-100 dataset using CLIP embeddings. Our results show that accuracy in both analogy and zero-shot classification tasks correlates with the embedding similarity. These findings can help explain performance differences in these tasks, and may lead to improved design of paired-embedding models in the future.