Large language models (LLMs) have demonstrated impressive multilingual understanding and reasoning capabilities, driven by extensive pre-training multilingual corpora and fine-tuning instruction data. However, a performance gap persists between high-resource and low-resource language tasks due to language imbalance in the pre-training corpus, even using more low-resource data during fine-tuning. To alleviate this issue, we propose LinguaLIFT, a two-stage instruction tuning framework for advancing low-resource language tasks. An additional language alignment layer is first integrated into the LLM to adapt a pre-trained multilingual encoder, thereby enhancing multilingual alignment through code-switched fine-tuning. The second stage fine-tunes LLM with English-only instruction data while freezing the language alignment layer, allowing LLM to transfer task-specific capabilities from English to low-resource language tasks. Additionally, we introduce the Multilingual Math World Problem (MMWP) benchmark, which spans 21 low-resource, 17 medium-resource, and 10 high-resource languages, enabling comprehensive evaluation of multilingual reasoning. Experimental results show that LinguaLIFT outperforms several competitive baselines across MMWP and other widely used benchmarks.