The phonological discrepancies between a speaker's native (L1) and the non-native language (L2) serves as a major factor for mispronunciation. This paper introduces a novel multilingual MDD architecture, L1-MultiMDD, enriched with L1-aware speech representation. An end-to-end speech encoder is trained on the input signal and its corresponding reference phoneme sequence. First, an attention mechanism is deployed to align the input audio with the reference phoneme sequence. Afterwards, the L1-L2-speech embedding are extracted from an auxiliary model, pretrained in a multi-task setup identifying L1 and L2 language, and are infused with the primary network. Finally, the L1-MultiMDD is then optimized for a unified multilingual phoneme recognition task using connectionist temporal classification (CTC) loss for the target languages: English, Arabic, and Mandarin. Our experiments demonstrate the effectiveness of the proposed L1-MultiMDD framework on both seen -- L2-ARTIC, LATIC, and AraVoiceL2v2; and unseen -- EpaDB and Speechocean762 datasets. The consistent gains in PER, and false rejection rate (FRR) across all target languages confirm our approach's robustness, efficacy, and generalizability.