Label-free SERS Discrimination of Proline from Hydroxylated Proline at Single-molecule Level Assisted by a Deep Learning Model

Discriminating the low-abundance hydroxylated proline from hydroxylated proline is crucial for monitoring diseases and eval-uating therapeutic outcomes that require single-molecule sensors. While the plasmonic nanopore sensor can detect the hydrox-ylation with single-molecule sensitivity by surface enhanced Raman spectroscopy (SERS), it suffers from intrinsic fluctuations of single-molecule signals as well as strong interference from citrates. Here, we used the occurrence frequency histogram of the single-molecule SERS peaks to extract overall dataset spectral features, overcome the signal fluctuations and investigate the citrate-replaced plasmonic nanopore sensors for clean and distinguishable signals of proline and hydroxylated proline. By ligand exchange of the citrates by analyte molecules, the representative peaks of citrates decreased with incubation time, prov-ing occupation of the plasmonic hot spot by the analytes. As a result, the discrimination of the single-molecule SERS signals of proline and hydroxylated proline was possible with the convolutional neural network model with 96.6% accuracy.

Egret Swarm Optimization Algorithm: An Evolutionary Computation Approach for Model Free Optimization

A novel meta-heuristic algorithm, Egret Swarm Optimization Algorithm (ESOA), is proposed in this paper, which is inspired by two egret species' (Great Egret and Snowy Egret) hunting behavior. ESOA consists of three primary components: Sit-And-Wait Strategy, Aggressive Strategy as well as Discriminant Conditions. The performance of ESOA on 36 benchmark functions as well as 2 engineering problems are compared with Particle Swarm Optimization (PSO), Genetic Algorithm (GA), Differential Evolution (DE), Grey Wolf Optimizer (GWO), and Harris Hawks Optimization (HHO). The result proves the superior effectiveness and robustness of ESOA. The source code used in this work can be retrieved from https://github.com/Knightsll/Egret_Swarm_Optimization_Algorithm; https://ww2.mathworks.cn/matlabcentral/fileexchange/115595-egret-swarm-optimization-algorithm-esoa.