Backbone-based Dynamic Graph Spatio-Temporal Network for Epidemic Forecasting

Accurate epidemic forecasting is a critical task in controlling disease transmission. Many deep learning-based models focus only on static or dynamic graphs when constructing spatial information, ignoring their relationship. Additionally, these models often rely on recurrent structures, which can lead to error accumulation and computational time consumption. To address the aforementioned problems, we propose a novel model called Backbone-based Dynamic Graph Spatio-Temporal Network (BDGSTN). Intuitively, the continuous and smooth changes in graph structure, make adjacent graph structures share a basic pattern. To capture this property, we use adaptive methods to generate static backbone graphs containing the primary information and temporal models to generate dynamic temporal graphs of epidemic data, fusing them to generate a backbone-based dynamic graph. To overcome potential limitations associated with recurrent structures, we introduce a linear model DLinear to handle temporal dependencies and combine it with dynamic graph convolution for epidemic forecasting. Extensive experiments on two datasets demonstrate that BDGSTN outperforms baseline models and ablation comparison further verifies the effectiveness of model components. Furthermore, we analyze and measure the significance of backbone and temporal graphs by using information metrics from different aspects. Finally, we compare model parameter volume and training time to confirm the superior complexity and efficiency of BDGSTN.

MPSTAN: Metapopulation-based Spatio-Temporal Attention Network for Epidemic Forecasting

Accurate epidemic forecasting plays a vital role for governments in developing effective prevention measures for suppressing epidemics. Most of the present spatio-temporal models cannot provide a general framework for stable, and accurate forecasting of epidemics with diverse evolution trends. Incorporating epidemiological domain knowledge ranging from single-patch to multi-patch into neural networks is expected to improve forecasting accuracy. However, relying solely on single-patch knowledge neglects inter-patch interactions, while constructing multi-patch knowledge is challenging without population mobility data. To address the aforementioned problems, we propose a novel hybrid model called Metapopulation-based Spatio-Temporal Attention Network (MPSTAN). This model aims to improve the accuracy of epidemic forecasting by incorporating multi-patch epidemiological knowledge into a spatio-temporal model and adaptively defining inter-patch interactions. Moreover, we incorporate inter-patch epidemiological knowledge into both the model construction and loss function to help the model learn epidemic transmission dynamics. Extensive experiments conducted on two representative datasets with different epidemiological evolution trends demonstrate that our proposed model outperforms the baselines and provides more accurate and stable short- and long-term forecasting. We confirm the effectiveness of domain knowledge in the learning model and investigate the impact of different ways of integrating domain knowledge on forecasting. We observe that using domain knowledge in both model construction and loss functions leads to more efficient forecasting, and selecting appropriate domain knowledge can improve accuracy further.