This paper proposes a robust nonlinear observer synthesis method for a population of systems modelled using the Koopman operator. The Koopman operator allows nonlinear systems to be rewritten as infinite-dimensional linear systems. A finite-dimensional approximation of the Koopman operator can be identified directly from data, yielding an approximately linear model of a nonlinear system. The proposed observer synthesis method is made possible by this linearity that in turn allows uncertainty within a population of Koopman models to be quantified in the frequency domain. Using this uncertainty model, linear robust control techniques are used to synthesize robust nonlinear Koopman observers. A population of several dozen motor drives is used to experimentally demonstrate the proposed method. Manufacturing variation is characterized in the frequency domain, and a robust Koopman observer is synthesized using mixed $\mathcal{H}_2$-$\mathcal{H}_\infty$ optimal control.