Neural Machine Translation models have replaced the conventional phrase based statistical translation methods since the former takes a generic, scalable, data-driven approach rather than relying on manual, hand-crafted features. The neural machine translation system is based on one neural network that is composed of two parts, one that is responsible for input language sentence and other part that handles the desired output language sentence. This model based on encoder-decoder architecture also takes as input the distributed representations of the source language which enriches the learnt dependencies and gives a warm start to the network. In this work, we transform Roman-Urdu to Urdu transliteration into sequence to sequence learning problem. To this end, we make the following contributions. We create the first ever parallel corpora of Roman-Urdu to Urdu, create the first ever distributed representation of Roman-Urdu and present the first neural machine translation model that transliterates text from Roman-Urdu to Urdu language. Our model has achieved the state-of-the-art results using BLEU as the evaluation metric. Precisely, our model is able to correctly predict sentences up to length 10 while achieving BLEU score of 48.6 on the test set. We are hopeful that our model and our results shall serve as the baseline for further work in the domain of neural machine translation for Roman-Urdu to Urdu using distributed representation.