This study examines the utility of functional connectivity (FC) and graph-based (GB) measures with a support vector machine classifier for use in electroencephalogram (EEG) based biometrics. Although FC-based features have been used in biometric applications, studies assessing the identification algorithms on heterogeneous and large datasets are scarce. This work investigates the performance of FC and GB metrics on a dataset of 184 subjects formed by pooling three datasets recorded under different protocols and acquisition systems. The results demonstrate the higher discriminatory power of FC than GB metrics. The identification accuracy increases with higher frequency EEG bands, indicating the enhanced uniqueness of the neural signatures in beta and gamma bands. Using all the 56 EEG channels common to the three databases, the best identification accuracy of 97.4% is obtained using phase-locking value (PLV) based measures extracted from the gamma frequency band. Further, we investigate the effect of the length of the analysis epoch to determine the data acquisition time required to obtain satisfactory identification accuracy. When the number of channels is reduced to 21 from 56, there is a marginal reduction of 2.4% only in the identification accuracy using PLV features in the gamma band. Additional experiments have been conducted to study the effect of the cognitive state of the subject and mismatched train/test conditions on the performance of the system.