The Fisher Information Matrix (FIM) provides a way for quantifying the information content of an observable random variable concerning unknown parameters within a model that characterizes the variable. When parameters in a model are directly linked to individual features, the diagonal elements of the FIM can signify the relative importance of each feature. However, in scenarios where feature interactions may exist, a comprehensive exploration of the full FIM is necessary rather than focusing solely on its diagonal elements. This paper presents an end-to-end black box system identification approach that integrates the FIM into the training process to gain insights into dynamic importance and overall model structure. A decision module is added to the first layer of the network to determine the relevance scores using the entire FIM as input. The forward propagation is then performed on element-wise multiplication of inputs and relevance scores. Simulation results demonstrate that the proposed methodology effectively captures various types of interactions between dynamics, outperforming existing methods limited to polynomial interactions. Moreover, the effectiveness of this novel approach is confirmed through its application in identifying a real-world industrial system, specifically the PH neutralization process.